Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 50943
Gene Symbol: FOXP3
FOXP3
0.060 GeneticVariation disease BEFREE Here, we found that GFP-FoxP3<sup>+</sup> knock-in (KI) mice showed alterations in the production of anti-nuclear autoantibodies (ANAs) and nephritis with different extent, depending on the presence or absence of lupus susceptibility gene locus 1 (<i>Sle1</i>) and KI method: contrasting with B6.<i>Sle1</i>.fGFP-FoxP3 mice, expressing GFP via N-terminal insertion, B6.<i>Sle1</i>.iGFP-FoxP3, expressing GFP via bicistronic internal ribosome entry site-driven promotion, exhibited significantly lower penetrance of serum ANA, comparing to control B6.<i>Sle1</i> mice. 31468991 2020
Entrez Id: 5867
Gene Symbol: RAB4A
RAB4A
0.050 GeneticVariation disease BEFREE Lupus-associated endogenous retroviral LTR polymorphism and epigenetic imprinting promote HRES-1/Rab4 expression and mTOR activation. 31805010 2020
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.050 Biomarker disease BEFREE We followed this by mechanistic work in vitro that resulted in the identification of junctional adhesion molecule A (JAM-A) as a novel important target gene dysregulated by EZH2 in lupus T cells (3). 31599115 2020
Entrez Id: 50848
Gene Symbol: F11R
F11R
0.030 Biomarker disease BEFREE We followed this by mechanistic work in vitro that resulted in the identification of junctional adhesion molecule A (JAM-A) as a novel important target gene dysregulated by EZH2 in lupus T cells (3). 31599115 2020
Entrez Id: 283131
Gene Symbol: NEAT1
NEAT1
0.020 Biomarker disease BEFREE Importantly, NEAT1 deficiency significantly attenuated the lupus symptoms in pristane-induced lupus mice. 31513833 2020
Entrez Id: 6285
Gene Symbol: S100B
S100B
0.010 GeneticVariation disease BEFREE Association of S100B polymorphisms and serum S100B with risk of systemic lupus erythematous in a Chinese population. 31271591 2020
Entrez Id: 9475
Gene Symbol: ROCK2
ROCK2
0.010 AlteredExpression disease BEFREE We found ROCK2 expression significantly increased in biopsies of lupus erythematosus, dermatomyositis, scleroderma and Kohlmeier-Degos disease. 31778951 2020
Entrez Id: 8694
Gene Symbol: DGAT1
DGAT1
0.010 Biomarker disease BEFREE In the meta-analyses, two CpG sites had a statistically significant non-linear association with MVPA. cg24155427 (p-value=1.19·10), located in an intergenic region in chromosome 1, has been previously associated with smoking, lupus and aging. cg09565397 (p-value=1.59·10), located within DGAT1 in chromosome 8, encodes an enzyme involved in triacylglycerol synthesis and has been associated with body mass index. 31652233 2020
Entrez Id: 6737
Gene Symbol: TRIM21
TRIM21
0.100 Biomarker disease BEFREE Patients with isolated anti-Ro52 had a wider variety of diseases associated, but among auto-immune diseases they were more prone to inflammatory myositis (OR 10.5 [1.4-81.7], <i>p</i> = 0.02) and inflammatory rheumatism (OR 4.6 [1.6-13.8], <i>p</i> = 0.006) in contrast to systemic lupus (OR 0.2 [0.1-0.3], <i>p</i> < 10<sup>-4</sup>) or primary Sjögren's syndrome (OR 0.1 [0.06-0.2], <i>p</i> < 10<sup>-4</sup>). 30915082 2019
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.100 Biomarker disease BEFREE 10-week old female lupus-prone (NZM2328), wild-type (BALB/c) and iNZM mice (lack a functional type I IFN receptor on NZM2328 background) were treated on their dorsal skin with 100 mJ/cm<sup>2</sup> of UVB for 5 consecutive days. 31248690 2019
Entrez Id: 54106
Gene Symbol: TLR9
TLR9
0.100 Biomarker disease BEFREE This finding together with reduced cytokine production upon TLR9 activation appears to mark postactivated lupus B cells. 30540579 2019
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 AlteredExpression disease BEFREE The absence of CD137L causes an immune deviation toward Th17, fewer IL-10-producing CD11b<sup>+</sup> cells and reduced serum IL-10 levels which potentially explain the more severe lupus in DKO mice while leading to reduced microglia activation, lesser cerebral damage and less severe neurological deficits. 31297111 2019
Entrez Id: 59067
Gene Symbol: IL21
IL21
0.100 Biomarker disease BEFREE PD-1hiCXCR5- T peripheral helper cells promote B cell responses in lupus via MAF and IL-21. 31536480 2019
Entrez Id: 59067
Gene Symbol: IL21
IL21
0.100 Biomarker disease BEFREE Altogether, our results indicate that β2-Glycoprotein I is able to elicit a local Interleukin-17/Interleukin-21 and Interferon-γ inflammation in lupus-antiphospholipid syndrome patients that might lead, if unabated, to plaque instability and subsequent arterial thrombosis, suggesting that the T helper 17/T helper 1 pathway may represent a novel target for the prevention and treatment of the disease. 30872365 2019
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.100 Biomarker disease BEFREE Here, we show that conventional dendritic cells (cDCs) from predisease lupus-prone B6.NZM Sle1/Sle2/Sle3 triple congenic (TCSle) mice produce more IL-10 than wild-type congenic cDCs upon TLR stimulation, and this overproduction is prevented by blocking the type I IFN receptor (IFNAR) with specific Abs. 31216373 2019
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.100 AlteredExpression disease BEFREE These results suggest upregulated STAT3/IL-17 expression in lupus patients. 30767092 2019
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.100 AlteredExpression disease BEFREE Lupus and control CD8+ T cells significantly increased STAT1 mRNA levels after treatment with IFNα. 30674474 2019
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 Biomarker disease BEFREE A better understanding of the role of IL-10 in B-cell responses and lupus would allow to identify the most promising therapies for individual SLE patients in the future. 31735515 2019
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.100 Biomarker disease BEFREE Here, we show that conventional dendritic cells (cDCs) from predisease lupus-prone B6.NZM Sle1/Sle2/Sle3 triple congenic (TCSle) mice produce more IL-10 than wild-type congenic cDCs upon TLR stimulation, and this overproduction is prevented by blocking the type I IFN receptor (IFNAR) with specific Abs. 31216373 2019
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.100 Biomarker disease BEFREE 10-week old female lupus-prone (NZM2328), wild-type (BALB/c) and iNZM mice (lack a functional type I IFN receptor on NZM2328 background) were treated on their dorsal skin with 100 mJ/cm<sup>2</sup> of UVB for 5 consecutive days. 31248690 2019
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 Biomarker disease BEFREE Here, we show that conventional dendritic cells (cDCs) from predisease lupus-prone B6.NZM Sle1/Sle2/Sle3 triple congenic (TCSle) mice produce more IL-10 than wild-type congenic cDCs upon TLR stimulation, and this overproduction is prevented by blocking the type I IFN receptor (IFNAR) with specific Abs. 31216373 2019
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.100 Biomarker disease BEFREE However, the low PKC levels in summer can still decrease further the low production of IL-2 in T cells of lupus patients augmenting the existing AP-1 defects. 30715676 2019
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.100 Biomarker disease BEFREE IL233 is more potent than IL-2 and IL-33 either singly or in combination in the treatment of lupus GN. 31103267 2019
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.100 Biomarker disease BEFREE Hypersensitive IFN Responses in Lupus Keratinocytes Reveal Key Mechanistic Determinants in Cutaneous Lupus. 30745462 2019
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.100 Biomarker disease BEFREE Hypersensitive IFN Responses in Lupus Keratinocytes Reveal Key Mechanistic Determinants in Cutaneous Lupus. 30745462 2019